Index A | B | C | D | E | F | G | H | I | J | L | M | N | O | P | Q | R | S | T | U | V | W A action_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) add_scope() (alchemiscale.storage.statestore.Neo4jStore method) add_task_restart_patterns() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) alchemiscale.base.api module alchemiscale.base.client module alchemiscale.cli module alchemiscale.compute.client module alchemiscale.compute.service module alchemiscale.interface.client module alchemiscale.models module alchemiscale.security.auth module alchemiscale.security.models module alchemiscale.settings module alchemiscale.storage.models module alchemiscale.storage.objectstore module alchemiscale.storage.statestore module alchemiscale.strategist.service module AlchemiscaleBaseClient (class in alchemiscale.base.client) AlchemiscaleBaseClientError AlchemiscaleBaseClientParam (class in alchemiscale.base.client) AlchemiscaleClient (class in alchemiscale.interface.client) AlchemiscaleClientError AlchemiscaleComputeClient (class in alchemiscale.compute.client) AlchemiscaleComputeClientError AlchemiscaleComputeManagerClient (class in alchemiscale.compute.client) AlchemiscaleComputeManagerClientError AlchemiscaleConnectionError AlchemiscaleStateStore (class in alchemiscale.storage.statestore) APISettings (class in alchemiscale.settings) assemble_network() (alchemiscale.storage.statestore.Neo4jStore method) AsynchronousComputeService (class in alchemiscale.compute.service) authenticate() (in module alchemiscale.security.auth) AuthenticationError B BaseAPISettings (class in alchemiscale.settings) beat() (alchemiscale.compute.service.SynchronousComputeService method) C cancel_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) check() (alchemiscale.storage.objectstore.S3ObjectStore method) (alchemiscale.storage.statestore.Neo4jStore method) check_exists() (alchemiscale.interface.client.AlchemiscaleClient method) claim (alchemiscale.storage.models.Task attribute) claim_taskhub_tasks() (alchemiscale.compute.client.AlchemiscaleComputeClient method) (alchemiscale.storage.statestore.Neo4jStore method) claim_tasks() (alchemiscale.compute.client.AlchemiscaleComputeClient method) (alchemiscale.compute.service.SynchronousComputeService method) clear_errored_computemanager() (alchemiscale.storage.statestore.Neo4jStore method) clear_task_restart_patterns() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) close() (alchemiscale.storage.statestore.Neo4jStore method) (alchemiscale.strategist.service.StrategistService method) compute_service_can_claim() (alchemiscale.storage.statestore.Neo4jStore method) compute_services_can_claim() (alchemiscale.storage.statestore.Neo4jStore method) ComputeAPISettings (class in alchemiscale.settings) ComputeIDBase (class in alchemiscale.storage.models) ComputeIdentity (class in alchemiscale.security.models) ComputeManagerID (class in alchemiscale.storage.models) ComputeManagerInstruction (class in alchemiscale.storage.models) ComputeManagerRegistration (class in alchemiscale.storage.models) ComputeManagerStatus (class in alchemiscale.storage.models) ComputeServiceID (class in alchemiscale.storage.models) ComputeServiceRegistration (class in alchemiscale.storage.models) create_credentialed_entity() (alchemiscale.storage.statestore.Neo4jStore method) create_network() (alchemiscale.interface.client.AlchemiscaleClient method) create_network_mark_subgraph() (alchemiscale.storage.statestore.Neo4jStore method) create_network_subgraph() (alchemiscale.storage.statestore.Neo4jStore method) create_task() (alchemiscale.storage.statestore.Neo4jStore method) create_taskhub_subgraph() (alchemiscale.storage.statestore.Neo4jStore method) create_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) create_transformations_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) CredentialedComputeIdentity (class in alchemiscale.security.models) CredentialedEntity (class in alchemiscale.security.models) CredentialedUserIdentity (class in alchemiscale.security.models) cycle() (alchemiscale.strategist.service.StrategistService method) D datetime_created (alchemiscale.storage.models.Task attribute) delete_network() (alchemiscale.storage.statestore.Neo4jStore method) delete_task() (alchemiscale.storage.statestore.Neo4jStore method) delete_taskhub() (alchemiscale.storage.statestore.Neo4jStore method) deregister_computemanager() (alchemiscale.storage.statestore.Neo4jStore method) deregister_computeservice() (alchemiscale.storage.statestore.Neo4jStore method) E envvar_dictify() (in module alchemiscale.cli) execute() (alchemiscale.compute.service.SynchronousComputeService method) execute_strategy_worker() (in module alchemiscale.strategist.service) expire_computemanager_registrations() (alchemiscale.storage.statestore.Neo4jStore method) expire_registrations() (alchemiscale.storage.statestore.Neo4jStore method) F failure_keys (alchemiscale.storage.models.Tracebacks attribute) FrozenSettings (class in alchemiscale.settings) G get_chemicalsystem() (alchemiscale.interface.client.AlchemiscaleClient method) get_chemicalsystem_networks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_chemicalsystem_transformations() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_computemanager_instruction() (alchemiscale.storage.statestore.Neo4jStore method) get_credentialed_entity() (alchemiscale.storage.statestore.Neo4jStore method) get_keyed_chain() (alchemiscale.storage.statestore.Neo4jStore method) get_n4js() (in module alchemiscale.storage.statestore) get_network() (alchemiscale.interface.client.AlchemiscaleClient method) get_network_actioned_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) get_network_chemicalsystems() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_failures() (alchemiscale.interface.client.AlchemiscaleClient method) get_network_results() (alchemiscale.interface.client.AlchemiscaleClient method) get_network_state() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_status() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_strategy() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_strategy_state() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_strategy_status() (alchemiscale.interface.client.AlchemiscaleClient method) get_network_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_transformations() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_network_weight() (alchemiscale.interface.client.AlchemiscaleClient method) get_networks_actioned_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) get_networks_state() (alchemiscale.interface.client.AlchemiscaleClient method) get_networks_status() (alchemiscale.interface.client.AlchemiscaleClient method) get_networks_weight() (alchemiscale.interface.client.AlchemiscaleClient method) get_s3os() (in module alchemiscale.storage.objectstore) get_scope_status() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_scoped_key() (alchemiscale.interface.client.AlchemiscaleClient method) get_settings_from_options() (in module alchemiscale.cli) get_strategies_for_execution() (alchemiscale.storage.statestore.Neo4jStore method) get_task_actioned_networks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_task_failures() (alchemiscale.interface.client.AlchemiscaleClient method) get_task_networks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_task_priority() (alchemiscale.storage.statestore.Neo4jStore method) get_task_restart_patterns() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_task_results() (alchemiscale.interface.client.AlchemiscaleClient method) get_task_status() (alchemiscale.storage.statestore.Neo4jStore method) get_task_transformation() (alchemiscale.compute.client.AlchemiscaleComputeClient method) (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_task_weights() (alchemiscale.storage.statestore.Neo4jStore method) get_taskhub() (alchemiscale.storage.statestore.Neo4jStore method) get_taskhub_actioned_tasks() (alchemiscale.storage.statestore.Neo4jStore method) get_taskhub_tasks() (alchemiscale.storage.statestore.Neo4jStore method) get_taskhub_unclaimed_tasks() (alchemiscale.storage.statestore.Neo4jStore method) get_taskhub_weight() (alchemiscale.storage.statestore.Neo4jStore method) get_taskhubs() (alchemiscale.storage.statestore.Neo4jStore method) get_tasks_priority() (alchemiscale.interface.client.AlchemiscaleClient method) get_tasks_status() (alchemiscale.interface.client.AlchemiscaleClient method) get_transformation() (alchemiscale.interface.client.AlchemiscaleClient method) get_transformation_actioned_tasks() (alchemiscale.storage.statestore.Neo4jStore method) get_transformation_chemicalsystems() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_transformation_failures() (alchemiscale.interface.client.AlchemiscaleClient method) get_transformation_networks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_transformation_results() (alchemiscale.interface.client.AlchemiscaleClient method) get_transformation_status() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_transformation_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) get_value() (alchemiscale.base.client.AlchemiscaleBaseClientParam method) GufeJSONResponse (class in alchemiscale.base.api) GzipRequest (class in alchemiscale.base.api) GzipRoute (class in alchemiscale.base.api) H heartbeat() (alchemiscale.compute.service.SynchronousComputeService method) heartbeat_computeservice() (alchemiscale.storage.statestore.Neo4jStore method) I initialize() (alchemiscale.storage.objectstore.S3ObjectStore method) (alchemiscale.storage.statestore.Neo4jStore method) InterruptableSleep (class in alchemiscale.compute.service) InvalidGufeKeyError InvalidScopeError is_superset() (alchemiscale.models.Scope method) iter_contents() (alchemiscale.storage.objectstore.S3ObjectStore method) J JWTSettings (class in alchemiscale.settings) L list_credentialed_entities() (alchemiscale.storage.statestore.Neo4jStore method) list_scopes() (alchemiscale.storage.statestore.Neo4jStore method) log_failure_compute_service() (alchemiscale.storage.statestore.Neo4jStore method) M Mark (class in alchemiscale.storage.models) max_retries (alchemiscale.storage.models.TaskRestartPattern attribute) minimize_scope_space() (in module alchemiscale.base.api) module alchemiscale.base.api alchemiscale.base.client alchemiscale.cli alchemiscale.compute.client alchemiscale.compute.service alchemiscale.interface.client alchemiscale.models alchemiscale.security.auth alchemiscale.security.models alchemiscale.settings alchemiscale.storage.models alchemiscale.storage.objectstore alchemiscale.storage.statestore alchemiscale.strategist.service N Neo4jStore (class in alchemiscale.storage.statestore) Neo4JStoreError Neo4jStoreSettings (class in alchemiscale.settings) network (alchemiscale.storage.models.NetworkMark attribute) (alchemiscale.storage.models.TaskHub attribute) NetworkMark (class in alchemiscale.storage.models) NetworkStateEnum (class in alchemiscale.storage.models) O ObjectStoreRef (class in alchemiscale.storage.models) P pattern (alchemiscale.storage.models.TaskRestartPattern attribute) priority (alchemiscale.storage.models.Task attribute) ProtocolDAGResultRef (class in alchemiscale.storage.models) pull_protocoldagresult() (alchemiscale.storage.objectstore.S3ObjectStore method) push_protocoldagresult() (alchemiscale.storage.objectstore.S3ObjectStore method) Q query_chemicalsystems() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) query_networks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) query_taskhubs() (alchemiscale.compute.client.AlchemiscaleComputeClient method) (alchemiscale.storage.statestore.Neo4jStore method) query_tasks() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) query_transformations() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) QueryGUFEHandler (class in alchemiscale.base.api) R register_computemanager() (alchemiscale.storage.statestore.Neo4jStore method) register_computeservice() (alchemiscale.storage.statestore.Neo4jStore method) remove_credentialed_identity() (alchemiscale.storage.statestore.Neo4jStore method) remove_scope() (alchemiscale.storage.statestore.Neo4jStore method) remove_task_restart_patterns() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) reset() (alchemiscale.storage.objectstore.S3ObjectStore method) (alchemiscale.storage.statestore.Neo4jStore method) resolve_task_restarts() (alchemiscale.storage.statestore.Neo4jStore method) S S3ObjectStore (class in alchemiscale.storage.objectstore) S3ObjectStoreError S3ObjectStoreSettings (class in alchemiscale.settings) Scope (class in alchemiscale.models) ScopedIdentity (class in alchemiscale.security.models) ScopedKey (class in alchemiscale.models) set_network_state() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) set_network_strategy() (alchemiscale.interface.client.AlchemiscaleClient method) (alchemiscale.storage.statestore.Neo4jStore method) set_network_strategy_awake() (alchemiscale.interface.client.AlchemiscaleClient method) set_network_weight() (alchemiscale.interface.client.AlchemiscaleClient method) set_networks_state() (alchemiscale.interface.client.AlchemiscaleClient method) set_networks_weight() (alchemiscale.interface.client.AlchemiscaleClient method) set_task_complete() (alchemiscale.storage.statestore.Neo4jStore method) set_task_deleted() (alchemiscale.storage.statestore.Neo4jStore method) set_task_error() (alchemiscale.storage.statestore.Neo4jStore method) set_task_invalid() (alchemiscale.storage.statestore.Neo4jStore method) set_task_priority() (alchemiscale.storage.statestore.Neo4jStore method) set_task_restart_patterns_allowed_restarts() (alchemiscale.interface.client.AlchemiscaleClient method) set_task_restart_patterns_max_retries() (alchemiscale.storage.statestore.Neo4jStore method) set_task_result() (alchemiscale.storage.statestore.Neo4jStore method) set_task_running() (alchemiscale.storage.statestore.Neo4jStore method) set_task_status() (alchemiscale.storage.statestore.Neo4jStore method) set_task_waiting() (alchemiscale.storage.statestore.Neo4jStore method) set_task_weights() (alchemiscale.storage.statestore.Neo4jStore method) set_taskhub_weight() (alchemiscale.storage.statestore.Neo4jStore method) set_tasks() (alchemiscale.storage.statestore.Neo4jStore method) set_tasks_priority() (alchemiscale.interface.client.AlchemiscaleClient method) set_tasks_status() (alchemiscale.interface.client.AlchemiscaleClient method) SleepInterrupted source_keys (alchemiscale.storage.models.Tracebacks attribute) specific() (alchemiscale.models.Scope method) start() (alchemiscale.compute.service.AsynchronousComputeService method) (alchemiscale.compute.service.SynchronousComputeService method) (alchemiscale.strategist.service.StrategistService method) state (alchemiscale.storage.models.NetworkMark attribute) status (alchemiscale.storage.models.Task attribute) stop() (alchemiscale.strategist.service.StrategistService method) StrategistService (class in alchemiscale.strategist.service) StrategyModeEnum (class in alchemiscale.storage.models) StrategyState (class in alchemiscale.storage.models) StrategyStatusEnum (class in alchemiscale.storage.models) StrategyTaskScalingEnum (class in alchemiscale.storage.models) SynchronousComputeService (class in alchemiscale.compute.service) T Task (class in alchemiscale.storage.models) task_to_protocoldag() (alchemiscale.compute.service.SynchronousComputeService method) TaskArchive (class in alchemiscale.storage.models) TaskHub (class in alchemiscale.storage.models) taskhub_sk (alchemiscale.storage.models.TaskRestartPattern attribute) TaskProvenance (class in alchemiscale.storage.models) TaskRestartPattern (class in alchemiscale.storage.models) TaskStatusEnum (class in alchemiscale.storage.models) Token (class in alchemiscale.security.models) TokenData (class in alchemiscale.security.models) tracebacks (alchemiscale.storage.models.Tracebacks attribute) Tracebacks (class in alchemiscale.storage.models) transaction() (alchemiscale.storage.statestore.Neo4jStore method) U update_compute_manager_status() (alchemiscale.storage.statestore.Neo4jStore method) update_strategy_state() (alchemiscale.storage.statestore.Neo4jStore method) UserIdentity (class in alchemiscale.security.models) V validate_scopes() (in module alchemiscale.base.api) validate_scopes_query() (in module alchemiscale.base.api) validate_secret() (in module alchemiscale.security.auth) W weight (alchemiscale.storage.models.TaskHub attribute)